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融合MRI信息的PET图像去噪: 基于图小波的方法

易利群 盛玉霞 柴利

易利群, 盛玉霞, 柴利. 融合MRI信息的PET图像去噪: 基于图小波的方法. 自动化学报, 2023, 49(12): 2605−2614 doi: 10.16383/j.aas.c201036
引用本文: 易利群, 盛玉霞, 柴利. 融合MRI信息的PET图像去噪: 基于图小波的方法. 自动化学报, 2023, 49(12): 2605−2614 doi: 10.16383/j.aas.c201036
Yi Li-Qun, Sheng Yu-Xia, Chai Li. PET images denoising with MRI information: A graph wavelet based method. Acta Automatica Sinica, 2023, 49(12): 2605−2614 doi: 10.16383/j.aas.c201036
Citation: Yi Li-Qun, Sheng Yu-Xia, Chai Li. PET images denoising with MRI information: A graph wavelet based method. Acta Automatica Sinica, 2023, 49(12): 2605−2614 doi: 10.16383/j.aas.c201036

融合MRI信息的PET图像去噪: 基于图小波的方法

doi: 10.16383/j.aas.c201036
基金项目: 国家自然科学基金(62173259, 61625305)资助
详细信息
    作者简介:

    易利群:武汉科技大学信息科学与工程学院硕士研究生. 主要研究方向为医学图像处理, 信号处理. E-mail: ylqgenuine@sina.cn

    盛玉霞:武汉科技大学信息科学与工程学院副教授. 2014年获武汉科技大学控制科学与工程专业博士学位. 主要研究方向为图像处理, 图信号处理. 本文通信作者. E-mail: shengyuxia@wust.edu.cn

    柴利:浙江大学控制科学与工程学院教授. 2002年获香港科技大学电子工程系博士学位. 主要研究方向为分布式优化, 滤波器组框架, 图信号处理, 网络化控制系统. E-mail: chaili@zju.edu.cn

PET Images Denoising With MRI Information: A Graph Wavelet Based Method

Funds: Supported by National Natural Science Foundation of China (62173259, 61625305)
More Information
    Author Bio:

    YI Li-Qun Master student at the School of Information Science and Engineering, Wuhan University of Science and Technology. Her research interest covers medical image processing and signal processing

    SHENG Yu-Xia Associate professor at the School of Information Science and Engineering, Wuhan University of Science and Technology. She received her Ph.D. degree in control science and engineering from Wuhan University of Science and Technology in 2014. Her research interest covers image processing and graph signal processing. Corresponding author of this paper

    CHAI Li Professor at the College of Control Science and Engineering, Zhejiang University. He received his Ph.D. degree in electrical engineering from Hong Kong University of Science and Technology in 2002. His research interest covers distributed optimization, filter bank frames, graph signal processing, and networked control systems

  • 摘要: 正电子发射断层成像(Positron emission tomography, PET)是一种强大的核医学功能成像模式, 广泛应用于临床诊断, 但PET图像的空间分辨率低且含有噪声, 有必要对PET图像进行去噪以提升PET图像的质量. 随着PET/MR (Magnetic resonance)等一体化成像设备的出现, 磁共振成像(Magnetic resonance imaging, MRI)的先验信息可用于PET图像去噪, 提高PET图像质量. 针对动态PET图像, 提出了一种融合MRI先验信息的PET图像图小波去噪新方法. 首先构建PET合成图像; 再将PET合成图像与MRI信息通过硬阈值方法进行融合; 接着在融合图像上构造图拉普拉斯矩阵; 最后通过图小波变换(Graph wavelet transfrom, GWT)对动态PET图像去噪. 仿真实验结果表明, 与单独的图滤波、图小波去噪方法以及其他结合MRI的PET图像去噪方法相比, 本文方法有更高的信噪比(Signal-to-noise ratio, SNR), 更好地保留了病灶信息; 本文方法的去噪性能与VGG (Visual Geometry Group)深度神经网络等基于学习的方法相当, 但不需要大量数据的训练, 计算复杂度低.
  • 图  1  两种图像示例

    Fig.  1  Example of two kinds of images

    图  2  无病灶PET图像去噪结果

    Fig.  2  Denoising results of normal PET images

    图  3  单病灶图像

    Fig.  3  Single-lesion images

    图  4  单病灶PET图像去噪结果

    Fig.  4  Denoising results of single-lesion PET images

    图  5  单病灶PET图像去噪残差图

    Fig.  5  Denoising residual map of single-lesion PET images

    图  6  不同方法病灶点CRC与背景区域STD曲线图

    Fig.  6  CRC-STD curves of the different denoising methods for single-lesion PET images

    表  1  本文方法参数设置

    Table  1  Parameter setting in this paper

    参数符号 参数设置
    n5
    k11
    $\theta $20
    $\eta $0.0008
    J4
    Threshold0.75
    下载: 导出CSV

    表  2  无病灶情况下结合MRI的PET图像去噪方法比较

    Table  2  Comparison of PET image denoising methods incorporated with MRI on the normal dataset

    方法 第6帧 第12帧 第18帧 第24帧
    SNR RMSE SNR RMSE SNR RMSE SNR RMSE
    文献[5]10.45291.6572 10.94573.0838 11.1680 19.5106 11.067520.4923
    文献[13]7.93432.21469.51843.634511.615318.531211.523219.4450
    本文方法11.78511.421512.2803 2.6445 12.6945 16.3661 12.6693 17.0413
    下载: 导出CSV

    表  3  无病灶情况下由PET合成图像构图的方法与本文方法比较

    Table  3  Comparison of the methods of constructing graph by PET composite image with the proposed method on the normal dataset

    方法 第6帧 第12帧 第18帧 第24帧
    SNR RMSE SNR RMSE SNR RMSE SNR RMSE
    图滤波7.76702.2577 9.72583.5488 11.5317 18.7104 11.483119.5350
    图小波11.40641.484911.79672.796012.539516.660812.463717.4495
    本文方法11.78511.421512.2803 2.6445 12.6945 16.3661 12.6693 17.0413
    下载: 导出CSV

    表  4  单病灶情况下结合MRI的PET图像去噪方法比较

    Table  4  Comparison of PET image denoising methods incorporated with MRI on the single-lesion dataset

    方法 第6帧 第12帧 第18帧 第24帧
    SNR RMSE SNR RMSE SNR RMSE SNR RMSE
    文献[5]10.44281.6614 11.00903.0692 11.1229 19.7005 10.981020.8295
    文献[13]8.60502.052910.07603.416911.695518.443711.587419.4249
    本文方法11.67391.441912.2405 2.6635 12.7017 16.4262 12.5982 17.2910
    下载: 导出CSV

    表  5  单病灶情况下由PET合成图像构图的方法与本文方法比较

    Table  5  Comparison of the methods of constructing graph by PET composite image with the proposed method on the single-lesion dataset

    方法 第6帧 第12帧 第18帧 第24帧
    SNR RMSE SNR RMSE SNR RMSE SNR RMSE
    图滤波8.74562.0190 10.21723.3621 11.5850 18.6797 11.484919.6554
    图小波11.36321.499811.70362.833312.519616.774212.409017.6698
    本文方法11.67391.441912.2405 2.6635 12.7017 16.4262 12.5982 17.2910
    下载: 导出CSV

    表  6  单病灶PET图像在不同光子数时各种去噪方法比较

    Table  6  Comparison of different denoising methods for single-lesion PET images with different photon numbers

    方法 光子数$7\times10^8 $/第12帧 光子数$7\times10^8 $/第24帧 光子数$7\times10^9$/第12帧 光子数$7\times10^9$/第24帧
    SNR RMSE SNR RMSE SNR RMSE SNR RMSE
    文献[5]11.44032.9205 11.287320.1078 11.4398 2.9207 11.288420.1053
    文献[13]11.47892.907611.475119.677711.46902.910911.280720.1229
    图滤波11.24742.986111.238720.220611.66302.846611.497119.6278
    图小波11.30282.967111.584919.430511.36092.947311.831518.8866
    本文方法11.96112.750611.9411 18.6497 11.9734 2.7467 12.0638 18.3881
    下载: 导出CSV
  • [1] Dutta J, Leahy R M, Li Q. Non-local means denoising of dynamic PET images. PloS ONE, 2013, 8(12): e81390. doi: 10.1371/journal.pone.0081390
    [2] Mansoor A, Bagci U, Mollura D J. Optimally stabilized PET image denoising using trilateral filtering. In: Proceedings of the IEEE International Conference on Medical Image Computing and Computer-Assisted Intervention. Boston, USA: 2014. 130–137
    [3] Buades A, Coll B, Morel J M. A non-local algorithm for image denoising. In: Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition. San Diego, USA: IEEE, 2005. 60–65
    [4] Jommaa H, Mabrouk R, Khlifa N, Morain-Nicolier, F. Denoising of dynamic PET images using a multi-scale transform and non-local means filter. Biomedical Signal Processing and Control, 2018, 41: 69–80. doi: 10.1016/j.bspc.2017.11.002
    [5] Yan J, Lim J C S, Townsend D W. MRI-guided brain PET image filtering and partial volume correction. Physics in Medicine and Biology, 2015, 60(3): 961–976. doi: 10.1088/0031-9155/60/3/961
    [6] Song T A, Yang F, Chowdhury S R, Kim K, Johnson K A, Fakhri, G A et al. PET image deblurring and super-resolution with an MR-based joint entropy prior. IEEE Transactions on Computational Imaging, 2019, 5(4): 530–539. doi: 10.1109/TCI.2019.2913287
    [7] Song T A, Chowdhury S R, Yang F, Dutta J. PET image super-resolution using generative adversarial networks. Neural Networks, 2020, 125: 83-91. doi: 10.1016/j.neunet.2020.01.029
    [8] Li T, Jiang C H, Gao J, Yang Y F, Liang D, Liu X, et al. Low-count PET image restoration using sparse representation. Nuclear Instruments and Methods in Physics Research Section A Accelerators Spectrometers Detectors and Associated Equipment, 2018, 888: 222-227. doi: 10.1016/j.nima.2018.01.083
    [9] Wang Y, Ma G, An L, Shi F, Zhang P, Lalush D S, et al. Semisupervised tripled dictionary learning for standard-dose PET image prediction using low-dose PET and multimodal MRI. IEEE Transactions on Biomedical Engineering, 2017, 64(3): 569-579. doi: 10.1109/TBME.2016.2564440
    [10] An L, Zhang P, Adeli E, Wang Y, Ma G K, Shi F, et al. Multi-level canonical correlation analysis for standard-dose PET image estimation. IEEE Transactions Image Process, 2016, 25(7): 3303-3315. doi: 10.1109/TIP.2016.2567072
    [11] Zhang Y, Zhang X. PET-MRI joint reconstruction with common edge weighted total variation regularization. Inverse Problems, 2018, 34(6): 065006. doi: 10.1088/1361-6420/aabce9
    [12] Bergounioux M, Papoutsellis E, Stute S, Tauber C. Infimal convolution spatiotemporal PET reconstruction using total variation based priors [Online], available: https://www.researchgate.net/publication/322918637_Infimal_convolution_spatiotemporal_PET_reconstruction_using_total_variation_based_priors, 26 January, 2018
    [13] Cheng J C K, Matthews J, Boellaard R, Sossi V. A MR guided denoising for PET using IHYPR-LR. In: Proceedings of the IEEE Nuclear Science Symposium and Medical Imaging Conference. Atlanta, USA: IEEE, 2017. 1–3
    [14] Tahaei M S, Reader A J, Collins D L. Two novel PET image restoration methods guided by PET-MR kernels: Application to brain imaging. Medical Physics, 2019, 46(5): 2085-2102. doi: 10.1002/mp.13418
    [15] Gong K, Berg E, Cherry S R, Qi J. Machine learning in PET: From photon detection to quantitative image reconstruction. Proceedings of the IEEE, 2020, 108(1): 51-68. doi: 10.1109/JPROC.2019.2936809
    [16] 田娟秀, 刘国才, 谷珊珊, 鞠忠建, 刘劲光, 顾冬冬. 医学图像分析深度学习方法研究与挑战. 自动化学报, 2018, 44(3): 401-424.

    Tian Juan-Xiu, Liu Guo-Cai, Gu Shan-Shan, Ju Zhong-Jian, Liu Jin-Guang, Gu Dong-Dong. Deep learning in medical image analysis and its challenges. Acta Automatica Sinica, 2018, 44(3): 401-424.
    [17] 施俊, 汪琳琳, 王珊珊, 陈艳霞, 王乾, 魏冬铭, 等. 深度学习在医学影像中的应用综述. 中国图象图形学报, 2020, 25(10): 1953-1981. doi: 10.11834/jig.200255

    Shi Jun, Wang Lin-Lin, Wang Shan-Shan, Chen Yan-Ming, Wang Qian, Wei Dong-Ming et al. Applications of deep learning in medical imaging: A survey. Journal of Image and Graphics, 2020, 25(10): 1953-1981. doi: 10.11834/jig.200255
    [18] 范家伟, 张如如, 陆萌, 何佳雯, 康霄阳, 柴文俊, 等. 深度学习方法在糖尿病视网膜病变诊断中的应用. 自动化学报, 2021, 47(3): 985−1004.

    Fan Jia-Wei, Zhang Ru-Ru, Lu Meng, He Jia-Wen, Kang Xiao-Yang, Chai Wen-Jun, et al. Applications of deep learning techniques for diabetic retinal diagnosis. Acta Automatica Sinica, 2021, 47(3): 985−1004.
    [19] Reader A J, Corda G, Mehranian A, Costa-Luis C D, Ellis S, Schnabel J A. Deep learning for PET image reconstruction. IEEE Transactions on Radiation and Plasma Medical Sciences, 2020, 5(1): 1-25.
    [20] Gong K, Guan J H, Liu C, Liu C C, Qi J Y. PET image denoising using a deep neural network through fine tuning. IEEE Transactions on Radiation and Plasma Medical Sciences, 2019, 3(2): 153-161. doi: 10.1109/TRPMS.2018.2877644
    [21] Gong Y, Shan H M, Teng Y Y, Zheng H R, Wang G, Wang S S. Deeply-supervised multi-dose prior learning for low-dose PET imaging. In: Proceedings of the 17th IEEE International Symposium on Biomedical Imaging Workshops. Iowa, USA: IEEE, 2020. 1–4
    [22] Gong Y, Shan H M, Teng Y Y, Zheng H R, Wang G, Wang S S. Low-dose PET image restoration with 2D and 3D network prior learning. In: Proceedings of the 17th IEEE International Symposium on Biomedical Imaging Workshops. Iowa, USA: IEEE, 2020. 1–4
    [23] Gong Y, Shan H G, Teng Y Y, Tu N, Li M, Liang G D, et al. Parameter-Transferred Wasserstein Generative Adversarial Network (PT-WGAN) for low-dose PET image denoising. IEEE Transactions on Radiation and Plasma Medical Sciences, 2021, 5(2): 213-223. doi: 10.1109/TRPMS.2020.3025071
    [24] Wang Y, Zhou L P, Yu B T, Wang L, Zu C, Lalush D S, et al. 3D auto-context-based locality adaptive multi-modality GANs for PET synthesis. IEEE Transactions on Medical Imaging, 2019, 38(6): 1328-1339. doi: 10.1109/TMI.2018.2884053
    [25] Shuman D I, Narang S K, Frossard P, Ortega A, Vandergheynst P. The emerging field of signal processing on graphs: Extending high-dimensional data analysis to networks and other irregular domains. IEEE Signal Processing Magazine, 2013, 30(3): 83–98. doi: 10.1109/MSP.2012.2235192
    [26] Sandryhaila A F, Moura J M. Big data analysis with signal processing on graphs: Representation and processing of massive data sets with irregular structure. IEEE Signal Processing Magazine, 2014, 31(5): 80–90. doi: 10.1109/MSP.2014.2329213
    [27] 杨杰, 赵磊, 郭文彬. 基于图谱域移位的带限图信号重构算法. 自动化学报, 2021, x(x): 1−11.

    Yang Jie, Zhao Lei, Guo Wen-Bin. Graph band-limited signals reconstruction method based graph spectral domain shifting. Acta Automatica Sinica, 2021, x(x): 1−11.
    [28] Cheung G, Magli E, Tanaka Y, Ng M K. Graph spectral image processing. Proceedings of the IEEE, 2018, 106(5): 907-930. doi: 10.1109/JPROC.2018.2799702
    [29] Guo S Y, Sheng Y X, Chai L, Zhang J X. Graph filtering approach to PET image denoising. In: Proceedings of the 1st International Conference on Industrial Artificial Intelligence. Shenyang, China: IEEE, 2019. 1–6
    [30] Hammond D K, VandergheynstT P, Gribonval R. Wavelets on graphs via spectral graph theory. Applied and Computational Harmonic Analysis, 2011, 30(2): 129–150. doi: 10.1016/j.acha.2010.04.005
    [31] Hammond D K, Vandergheynst P, Gribonval R. The spectral graph wavelet transform: Fundamental theory and fast computation. Vertex-Frequency Analysis of Graph Signals. Springer, 2019. 141–175
    [32] Deutsch S, Ortega A, Medioni G. Manifold denoising based on spectral graph wavelets. In: Proceedings of the IEEE International Conference on Acoustics, Speech and Signal Processing. Shanghai, China: IEEE, 2016. 4673–4677
    [33] Wang G, Qi J. PET image reconstruction using kernel method. IEEE Transactions on Medical Imaging, 2014, 34(1): 61–71.
    [34] Shepp L A, Vardi Y. Maximum likelihood reconstruction for positron emission tomography. IEEE Transactions on Medical Imaging, 1982, 1(2): 113-122. doi: 10.1109/TMI.1982.4307558
    [35] Aubert-Broche B, Griffin M, Pike G B, Evans A C, Collins D L. Twenty new digital brain phantoms for creation of validation image databases. IEEE Transactions on Medical Imaging, 2006, 25(11): 1410–1416. doi: 10.1109/TMI.2006.883453
    [36] Feng D, Wong K P, Wu C M, Siu W C. A technique for extracting physiological parameters and the equired input function simultaneously from PET image measurements: Theory and simulation study. IEEE Transactions on Information Technology in Biomedicine, 1997, 1(4): 243–254. doi: 10.1109/4233.681168
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  • 收稿日期:  2020-12-15
  • 录用日期:  2021-04-29
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  • 刊出日期:  2023-12-27

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